LncRNAs are known to be more tissue-specific than protein-coding genes21,22. We thus wondered whether lncRNA’s higher tissue specificity was due to lncRNAs being expressed in fewer cells or to lncRNAs being more cell-type specific. To address this, we compared cell-type specificity values bet...
The workflow can currently be run using eitherDockerorSingularityto provide isolation of the required software. Both methods are automated out-of-the-box provided either docker or singularity is installed. This is controlled by the-profileparameter as exemplified below. ...
The increasing availability of large-scale single-cell atlases has enabled the detailed description of cell states. In parallel, advances in deep learning allow rapid analysis of newly generated query datasets by mapping them into reference atlases. However, existing data transformations learned to map ...
Pringle NP, Richardson WD (1993) A singularity of PDGF alpha-receptor expression in the dorsoventral axis of the neural tube may define the origin of the oligodendrocyte lineage. Development 117(2):525–533 PubMed CAS Google Scholar Ono K, Bansal R, Payne J, Rutishauser U, Miller RH (19...
The analyses were performed using R (R-project) from the rocker/verse 4.2 image (seekey resources table). The singularity container definition file (supplemental data) defines additional tools and software added to the container image. Assay plate quality control ...
I tried to install the 3.2. but it does not work. Are the codes below the right ones to use? Thank you so much! remotes::install_github("ChristophH/sctransform@develop") or? devtools::install_github(repo = 'ChristophH/sctransform') ...
The workflow can currently be run using either Docker or Singularity to provide isolation of the required software. Both methods are automated out-of-the-box provided either docker or singularity is installed. This is controlled by the -profile parameter as exemplified below. It is not required ...
The workflow can currently be run using eitherDockerorSingularityto provide isolation of the required software. Both methods are automated out-of-the-box provided either docker or singularity is installed. This is controlled by the-profileparameter as exemplified below. ...