你把结果贴到excel里面查看，看着乱乱的
2. 进入CDD数据库,还是红圈里的选项 3. 进入后有以下界面,如果是单条序列,直接进入CD-Search选项,如果要批量查询,则进入Batch-CD- Search。此处以单条序列为例进行介绍。 4. 进入CD-search后可直接粘贴核苷酸序列或者氨基酸序列到此框中。 5. 举个栗子: 输入我要查询的序列后就有了下面的结果,这样我就可以继续...
Continuing on our quest to strengthen all links within CDD Vault, we are happy to announce Batch Links are now available as Protocol Readouts! When looking for small molecule-protein interactions, are you keeping track of the specific proteins and cell lines...
然后选择CD-search(单个基因),或者Batch CD-Search(多个基因)。attachments-2018-07-HXZXbUUl5b55498230963.jpg2.预测单条序列的保守结构域,点击CD-search进⼊:粘贴基因的蛋⽩序列,或者是核酸序列都可以,注意为fasta序列,如果你知道基因的GI或Accession号,也可以直接数据这些ID就可以查询,右⽅OPTIONS中选择要搜索...
使用Batch CD-Search 结果: Query: 查询序列的标识符或名称。 Hit type: 表示匹配的保守结构域的类型, 可能的值包括 Domain, Family, Motif, 等,用于描述匹配的保守结构域的种类。 PSSM-ID: 保守结构域的位置特定得分矩阵 (PSSM) 的标识符。 From: 保守结构域在查询序列中的起始位置。
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Batch/Run is good for replicate data in a single experiment (run). Replicated data from the same batch of a molecule will be averaged together for each run of the protocol. Molecule/Protocol works well for generating summary results for molecules tested in a protocol. Data from all batches ...
Fill in the initial form with the structure and all batch information, as shown in the table above. Structure can be supplied as SMILES, MOL files, or extended SMILES (CXSMILES). We’ll use the structure editor here, but feel free to try out entering the SMILES string OC(=O)C1=CC=CN...
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print(response.json()) Another example using POST to create a new compound, respectively a new batch of an existing molecule: import requests headers = {'X-CDD-token':<YOUR TOKEN HERE>"} base_url = "https://app.collaborativedrug.com/api/v1/vaults/<vault_id>/" ...