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The distribution of pLDDT values for structures from singleton (blue) or non-singleton (orange) clusters are plotted. The X axis indicates the pLDDT, while the Y axis indicates the density (or proportion) of proteins that have the indicated pLDDT value. B. The distribution of MSA depths ...
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Six studies were excluded from the 29 human studies because either a.) birth month was used as a control variable or b.) it was not possible to access the text. Of the remaining 23 relevant human studies, one was about the birth seasonality of males and its effects on reproductive perform...
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Probes on sex chromosomes and control probes were removed prior to meta-analysis. Cross-reactive probes and polymorphic probes were dealt with post-meta-analysis. Each cohort also provided information on genomic infla- tion in their cohort-specific EWAS models. Leave-one-out analyses were carried ...
p-value > 0.05. Cross-hybridising probes, probes targeting single-nucleotide polymorphisms with overall minor allele frequency ≥ 0.05, and control probes were also removed. Samples were removed if there was a mismatch between predicted sex (minfi) and recorded sex (n...
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sequencing library from blank water control samples due to the inherent very low amounts of DNA (these are typically below the threshold for library construction); (ii) the ability to clearly differentiate signal (in the titration series: human sequences) from artefacts (non-human sequences); ...