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DiFranza and members of the Poon Lab for helpful discussions. This work was supported in part by National Institutes of Health grants HL067966 and HL072849. DLY was recipient of a National Institute of Mental Health predoctoral fellowship MH012697. References 1. McCormick DA: Brain calculus: ...
Our previous study demonstrated that a meCpG can modulate the interaction between genetic variant and gene expression by altering CTCF binding [7]. Building on this, we hypothesized that other meCpGs sites, where methylation levels are associated with CTCF occupancy, might exert similar effects. To...
Authors' contributions LAB was involved in all aspects of the studies presented, LAB created the experimental design, directed the experi- ments, performed data analysis and prepared the manu- script, TKG performed analyses of the microarray data, JDM performed the statistical analyses, DS performed...
Authors' contributions LAB was involved in all aspects of the studies presented, LAB created the experimental design, directed the experi- ments, performed data analysis and prepared the manu- script, TKG performed analyses of the microarray data, JDM performed the statistical analyses, DS performed...
http://linnarssonlab.org/osmFISH/osmFISH_SScortex_mouse_all_cells.loom. Eng CL, Lawson M, Zhu Q, Dries R, Koulena N, Takei Y, Yun J, Cronin C, Karp C, Yuan GC, Cai L. Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH. Datasets; 2019. https://github.com/Cai...
A BMG Fluostar Optima microplate reader (BMG Labtech, Aylesbury UK) was used to take 600 nm absorbance readings at 10-min intervals over a period of 24-35 h. A curve-fitting algorithm, implemented in R, calculated the maximum growth rate from the measured growth curve, and the median ...
The authors would like to thank the Shiyajia lab (www.shiyanjia.com) for their help in language polishing. Author information Author notes Shuo Zhang, Xinyu Zhao and Yuhao Xue contributed equally to this work. Authors and Affiliations Department of Burns, The First Affiliated Hospital of Anhui ...
For participants randomized into the control arm, if a study-related lab is overdue, then they are notified by research staff at the community-based FQHC and encouraged to complete a blood draw at a Quest lab. Secondary outcomes, retention in HIV care and gaps in HIV medical visits, will ...
Clean reads were mapped to the reference genome using HISAT2 v2.1.0 (https://daehwankimlab.github.io/hisat2/) [70], with the resulting SAM files being transformed into BAM files and sorted by chromosome positions with Samtools v1.9 (https://github.com/samtools/samtools) [71]. ...