[ 源代码: python-biom-format ] 软件包: python3-biom-format (2.1.8+dfsg-1ubuntu2) [ports] [universe] python3-biom-format 的相关链接 Ubuntu 的资源: 报告问题 下载源码包 python-biom-format: [python-biom-format_2.1.8+dfsg-1ubuntu2.dsc] [python-biom-format_2.1.8+dfsg.orig.tar.xz] ...
python3/dist-packages/biom/assets/exercise_api.py /usr/lib/python3/dist-packages/biom/assets/exercise_cli.sh /usr/lib/python3/dist-packages/biom/cli/__init__.py /usr/lib/python3/dist-packages/biom/cli/installation_informer.py /usr/lib/python3/dist-packages/biom/cli/metadata_adder.py /...
status 1: command: 'c:\python27\python.exe' 'c:\python27...
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources/__init__.py", line 899, in require needed = self.resolve(parse_requirements(requirements)) File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources...
这是一个R包与BIOM格式。这个包包括基本工具阅读biom-format文件、访问和构造子集数据表从biom对象(这是更复杂的比一个表),以及有限的支持写biom-object回到biom-format文件。这个API的设计是为了匹配python API和其他工具包括biom-format项目,但明显味道“R”R用户应该很熟悉。这包括S4的类和方法,以及共同核心函数/...
1. python pkg: pip install numpy 由于最新版的biom-format还不支持python3,所以需要切换到python2 sudo update-alternatives --config python 然后安装 pip install biom-format 为了处理BIOM 2.0+的文件,需要安装这个: pip install h5py 2. R pkg:
deb http://cz.archive.ubuntu.com/ubuntuplucky main universe Replacingcz.archive.ubuntu.com/ubuntuwith the mirror in question. You can download the requested file from thepool/universe/p/python-biom-format/subdirectory at any of these sites:...
[ 源代码: python-biom-format ] 软件包: python3-biom-format (2.1.8+dfsg-1ubuntu2) [ports] [universe] python3-biom-format 的相关链接 Ubuntu 的资源: 报告问题 下载源码包 python-biom-format: [python-biom-format_2.1.8+dfsg-1ubuntu2.dsc] [python-biom-format_2.1.8+dfsg.orig.tar.xz] ...
(fp) File "/prod/apps/conda/3/envs/qiime2-2019.7/lib/python3.6/site-packages/biom/parse.py", line 412, in parse_biom_table t = Table.from_tsv(fp, None, None, lambda x: x) File "/prod/apps/conda/3/envs/qiime2-2019.7/lib/python3.6/site-packages/biom/table.py", line 4649, ...
1.打开anaconda prompt,直接打开,我没有用管理员身份打开。 2.第一步需要一个python2的环境,因为biom-format只支持2。 conda create -n biom_py2 python=2.7 3.进入创建的biom_py2环境中 activate biom_py2 3.如果需要numpy,安装一下 conda install numpy 4.安装biom-format 直接conda install报错,改为下述...