to non-commercial academic research purposes. Request for data access can be submitted to R.L. and will receive a response typically within 10 days. Data will be shared through cloud storage and available for 1 year once access has been granted.Source dataare provided with this paper. ...
Synthetic biology has reached the same inflection point achieved by computer science in the 1950's The foundational pieces emerging, in the form of standardized DNA parts, packaged for combinatoric assembly using standards such as BioBricks. But: Creating new DNA parts is tedious and time-...
The terms “Turing machine”, “computer”, and “algorithm” are all synonymous in this paper. Turing machines are a key concept in mathematics, because a Turing machine can solve any computable function, and Galileo said, “the laws of nature are written in the language of mathematics” (...
This paper is largely based on the outcome of an AFOSR-funded workshop titled “The Compositionality Problem in Synthetic Biology: New Directions for Control Theory” held on June 26–27, 2017 at MIT. The workshop was co-organized by D. Del Vecchio, R. M. Murray, and E. D. Sontag an...
I could go on for pages taking this paper apart, but I’ll bring up just one more term that’s seen as ableist: the population-genetic word “fitness”. The authors’ discussion is muddled because they use “fitness” as equivalent to “able-bodied”, implying that “lower f...
Next, to understand the volume of previous studies on target genes associated with the MGPs predicted for CNS-GBM/Oligo, papers on 13 target genes from the predicted MGPs were retrieved from PubMed (as of May 2021; Fig.5b). This paper retrieval was implemented twice, once with an additional...
GK carried out the experiments. GK performed transcriptome data analysis. GK and DS developed the randomization test to infer signal convergence. PM, DS, and YL developed the machine learning approach and the SSM algorithm. GK, PM, DS, and GC wrote the paper....
implemented in BiologicalNetworks allows accessing all integrated data simultaneously, from specified databases only, or in conjunction with the user's data. BiologicalNetworks provides an interactive and user-friendly interface with a strong emphasis on graphical data representation. This paper aims to ...
JGDP, PT and their respective institutions have applied for a patent for use of the East Coast fever tolerance locus mentioned in this paper in breeding programmes.Additional information Publisher’s Note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institu...
For comparison, both results are reported throughout the paper. Life form shifts The character state reconstruction of life form is shown in Figure 7 (see Table 2 for the definitions). The reconstruc- tion of life form on the Bayesian cladogram required 68 steps and the character is ...