Abstract: A curated list of resources for learning bioinformatics. Some of this repo resources were collected by BioInstaller project. You can use BioInstaller to directly download the source code or database files, or fetch the meta information by BioInstaller::get.meta()$item. Purpose: Provide...
Therefore, this study aimed to explore both T2D- and ccRCC-causing sKGs highlighting their pathogenetic mechanisms and candidate common drug molecules for taking a better treatment plan against ccRCC with T2D, by using the integrated bioinformatics and system biology approaches. Materials and methods...
Machine learning helps to determine the diverse conformations of RNA molecules An innovative technique called HORNET uses atomic force microscopy and a machine-learning architecture called a deep neural network to recapitulate the 3D structures of individual RNA molecules. This method enables the study of...
Hao,PG Xiao - 《Evolutionary Bioinformatics Online》 被引量: 11发表: 2015年 Exploring study on the scavenging activity on O2.- and correlative chemical characteristic fingerprint of Crataegus leaves. Medicine,Nanchang,Jiangxi 330004,China;2.Department of Chinese Complex Recipe Research,China Pharmaceutica...
Platinum genomes phased variant calls: https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001224.v1.p1 ICGC: https://dcc.icgc.org/ Cancer Cell Lines Encylopedia: https://gdc.cancer.gov/ Deep sequencing of 3 cancer cell lines (2 colorectal, one breast cancer) on...
The aim of the course is to introduce students to bioinformatics resources and tools for molecular biology research by having some of the best researchers in Norway to talk about their field in general and then present their own work. Students are encouraged to bring a lap-top; we will be ...
In this study, we reanalyzed several gene expression profiles from the GEO database. The DEGs were compared between melanoma and normal tissues, and overlapping DEGs were obtained using the Venn online tool. By PPI (protein–protein interaction) network construction [9] and functional enrichment an...
Geneomics is the study of all genes in an organism to understand their molecular organization, function, interaction and evolutionary history. Genomics begins with the discoveries ofGregor Mendel Genomics Software Deep Variant- analysis pipeline that uses a deep neural network to call genetic variants ...
Case Study 3: Quantitative visualization of phylogentic trees Through this comparative analysis of adjacent periodontal and peri-implant microbiomes, we introduce the PhyloToAST tool for visualizing phylogenetic trees with quantitative data. Placement of dental implants is an increasingly common procedure, ...
Page 11 of 19 (page number not for citation purposes) BMC Bioinformatics 2008, 9:405 http://www.biomedcentral.com/1471-2105/9/405 Table 6: Redundancy between pairs of interaction datasets processed in this study. BIND BioGRID DIP HPRD IntAct MINT MPACT MPPI OPHID 62893 20929 25969 2766 ...