本综述讨论了微生物组研究各阶段工作的指南,从实验设计、收集储存样品、测序数据的图形结果中挖掘规律等,均对结果与生物学解释有影响。 本文主要参考文献:Best practices for analysing microbiomes 以及参考公众号刘永鑫Adam
Advances in DNA sequencing technologies and data analysis have provided drastic improvements in microbiome analyses, for example, in taxonomic resolution, false discovery rate control and other properties, over earlier methods. In this Review, we discuss the best practices for performing a microbiome ...
摘要: This month's Genome Watch highlights how the development of new approaches for quantifying the human microbiome may pave the way for a better understanding of microbial shifts in the context of human health and disease. DOI: 10.1038/s41579-018-0029-9 被引量: 17 年份: 2018 收藏...
best practices for analysing microbiomes概括 【最新版1篇】 篇1 目录 1.微生物组分析的最佳实践概述 2.为什么需要最佳实践 3.最佳实践的范畴 4.具体最佳实践的例子 5.最佳实践的实施和影响 篇1正文 在分析微生物组时,最佳实践的运用至关重要。这些实践不仅能确保分析的准确性和可重复性,而且还可以提高数据...
Best practices for analysing microbiomes的学习笔记 最近Rob Knight的这篇review十分火,我拜读完了以后,也总结了一下我的阅读笔记。 分享一下,转载麻烦标注一下出处。
D. Measuring the microbiome: best practices for developing and benchmarking microbiomics methods. Comput. Struct. Biotechnol. J. 18, 4048–4062 (2020). Article CAS PubMed PubMed Central Google Scholar Meyer, F. et al. Tutorial: assessing metagenomics software with the CAMI benchmarking toolkit...
Best Practices for Biomedical Research Data Management (HE) Harvard Medical School via Canvas Network With the increasing focus on research data, this course has been developed to address present and future researchers’ data management learning needs.★★★ (49 ratings) Industrial Pharmacy-I H.N....
Here we provide an overview of current best practices in metabarcoding analysis of fungal communities, from experimental design through molecular and computational analyses. By reanalysing published data sets, we demonstrate that operational taxonomic units (OTUs) outperform amplified sequence variants (ASVs...