Understanding the Benjamini-Hochberg method Tan Siew Li, Linda Department of Statistics and Applied Probability National University of Singapore False discovery rate • False discovery rate (FDR) is the expected proportion of tests which are incorrectly called significant out of all the tests which ...
The Benjamini–Hochberg method controls the False Discovery Rate (FDR) using sequential modified Bonferroni correction for multiple hypothesis testing. While the Bonferroni correction relies on the Family Wise Error Rate (FWER), Benjamini and Hochberg introduced the idea of a FDR to control for multipl...
利用R自带的基础包中的 p.adjust() 可以进行多重检验的P值矫正。p.adjust(p, method = p.adjust.methods, n = length(p))实例：round() 指定结果输出的小数点位数。输出结果为 按照上面介绍的BH法，我们可以手算验证矫正的结果为：0.08，0.06，0.325，0.510 注意原本排第一的检验结果矫正...
您通常不需要重新发明轮子。p.adjust(p, method = 'hochberg', n = length(p))
您通常不需要重新发明轮子。p.adjust(p, method = 'hochberg', n = length(p))
Adjust p-value by Benjamini and Hochberg methodpValues
Example 1: Repeat Example 1 ofDealing with Familywise Errorusing the Benjamini-Hochberg method. The result is shown in Figure 1. E.g. cell R8 contains the formula =P$3*Q8/P$4. The formulas in column S are identical to those used in column M of Figure 1 ofHolm’s ...
method = "bonferroni") Data$BH = p.adjust(Data$Raw.p, method = "BH") Data$Holm = p.adjust(Data$ Raw.p, method = "holm") Data$Hochberg = p.adjust(Data$ Raw.p, method = "hochberg") Data$Hommel = p.adjust(Data$ Raw.p, method = "hommel") Data$BY = p.adjust(Data$ Raw.p...
Understanding the Benjamini-Hochberg method, Tan Siew Li, Linda,National University of Singapore https://cpb-us-w2.wpmucdn.com/blog.nus.edu.sg/dist/0/3425/files/2018/10/Understanding-Benjamini-Hochberg-method-2ijolq0.pdfcpb-us-w2.wpmucdn.com/blog.nus.edu.sg/dist/0/3425/files/2018/10...
Benjamini and Hochberg's method for controlling the false discovery rate is applied to the problem of testing infinitely many contrasts in linear models. Exact, easily calculated critical values are derived, defining a new multiple comparisons method for testing contrasts in linear models. The method...