(1)可从VCF中提取指定样本信息 bcftools index *vcf.gz bcftools view -S samples *vcf.gz -Oz -o *_sampels.vcf.gz (2)对vcf进行过滤 bcftools view -i 'F_MISSING < 15 & MAC > 3' -m2 -M2 *vcf -Oz -o *fil.vcf (3) 指定染色体位置# 格式Chr\tpos bcftools view -R Chr_pos *vcf.gz...
bcftools view -m2 -M2 -v snps input.vcf.gz / #select only the multiallelic snps bcftools view -m3 -v snps input.vcf.gz