valuesofTAGencountered(i.e.-tagRGcreates aBAMfileforeach read groupinoriginalBAMfile) 简单来说,bamtools split 用法为: -in :指定输入的需要分割的bam文件 -reference :按染色体分割 -refPrefix :将按染色体分割生成的文件名字前缀"REF_"替换 -tagPrefix:将按tag分割生成的文件名字前缀"TAG_"替换 1.按染色体...
I am trying to split a large BAM file into smaller bam files by tags that contain a cellular barcode. Bamtools is able to generate the files, but is unable to write the sequences into them. I used the following command: bamtools split -tag CB -in possorted_genome_bam_1.bam It ...
description_template: "{{ tool_name }} {{ description }} using bamtools split" 1 change: 1 addition & 0 deletions 1 tool_collections/bamtools/bamtools_split/bamtools_split_mapped.xml Original file line numberDiff line numberDiff line change @@ -3,6 +3,7 @@ <macros> <import>macros.xml...
bam文件可以按照染色体或者tag分割,bam文件的分割可以使用bamtools.用法: 简单来说,bamtools split 用法为:-in :指定输入的需要分割的bam...
splitByRG.cpp fixed libgab depedency Dec 9, 2020 subSampleBAM.cpp Adding stuff Jul 3, 2014 subsamplebamFixedNumber.cpp fixed libgab depedency Dec 9, 2020 subsamplebamFixedNumberCollate.cpp fixed libgab depedency Dec 9, 2020 subsamplebamFixedNumberPair.cpp ...
split.o version 0.31 - June 2011 June 7, 2011 09:45 stats.cpp version 0.57 - October 2011 October 14, 2011 22:02 stats.h version 0.55 - September 2011 September 30, 2011 15:37 stats.o version 0.31 - June 2011 June 7, 2011 09:45 ...