a database for the identification and analysis of transcription factor binding sites in the Arabidopsis thaliana genome - Hehl () Citation Context ... that are members of the same family. The data content and the use of the database is described online and in the respective publications. ...
At least 30 % of the genes in the database are associated with multiple mutants or mutants that have multiple names (Fig.2). These have been compiled in the database to reduce confusion in searches for information. Overall, this database can provide a tool for exploring the relationships be...
Guo AY, He K, Liu D, Bai SN, Gu XC, Wei LP, Luo JC: DATF: a database of Arabidopsis transcription factors. Bioinformatics. 2005, 21 (10): 2568-2569. 10.1093/bioinformatics/bti334. PubMed CAS Google Scholar Riechmann JL, Heard J, Martin G, Reuber L, Jiang CZ, Keddie J, Ad...
Guo AY, He K, Liu D, Bai SN, Gu XC, Wei LP, Luo JC: DATF: a database of Arabidopsis transcription factors. Bioinformatics. 2005, 21 (10): 2568-2569. 10.1093/bioinformatics/bti334. PubMed CAS Google Scholar Riechmann JL, Heard J, Martin G, Reuber L, Jiang CZ, Keddie J, Ad...
402 of 1461 DEGs mapped onto the KEGG database forArabidopsis(Supplementary Fig.S4a) and 5 terms were significantly enriched (CorrectedP-value < 0.05). Similarly, at 100 mM NaCl, 353 of 1288 DEGs mapped onto the KEGG database forArabidopsis(Supplementary Fig.S4b) and six terms were ...
AP2/ERF proteins of apple (Malus domestica) and Arabidopsis were obtained from the plant transcription factor database (http://plntfdb.bio.uni-potsdam.de/v3.0/). The phylogenetic relationship of RcAP2/ERF was established by the neighbor-joining method with 1000 bootstraps values and was then ...
An automated pipeline for analyzing arabidopsis luciferase imaging data arabidopsisluciferase UpdatedOct 3, 2023 Python 🌱🧬 Collection of scripts for the paper: "PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave" (The Pla...
PlantCARE is a database of plant cis-acting regulatory elements, enhancers and repressors. Besides the transcription motifs found on a sequence, it also of... Rombauts,Dehais,V Montagu,... - 《Nucl Acid Res》 被引量: 1571发表: 1999年 A plant leucine zipper protein that recognizes an abs...
Here we show that a random forest machine learning approach, which incorporates the 3D-shape of DNA, enhances binding prediction for all 216 tested Arabidopsis thaliana transcription factors and improves the resolution of differential binding by transcription factor family members which share the same ...
A MYB transcription factor regulates very-long-chain fatty acid biosynthesis for activation of the hypersensitive cell death response in Arabidopsis. Plant Cell 2008, 20, 752–767. [Google Scholar] [CrossRef] [PubMed] Tan, L.; Rong, W.; Luo, H.; Chen, Y.; He, C. The Xanthomonas ...