pythonbioinformaticsvcfvariant-annotation UpdatedOct 16, 2023 Python bioforensics/rsidx Star16 Code Issues Pull requests Library for indexing VCF files for random access searches by rsID searchbioinformaticsgenomicsvariant-annotation UpdatedAug 14, 2023 ...
PyAnnotation is a Python Library to access and manipulate linguistically annotated corpus files. - cidles/pyannotation
Datumaro dataset framework allows additional dataset transformations with its command line tool and Python library. For more information about the supported formats, see: Annotation Formats. Annotation formatImportExport CVAT for images ✔️ ✔️ CVAT for a video ✔️ ✔️ Datumaro ✔...
PYClassLibrary PYConsole PYConsoleApplication PYDebugInteractiveWindow PYFile PYFileNode PYInteractiveWindow PYMPI PYProjectNode PyramidChart PYSilverlight PYSourceFile PythonPackage PYWebApplication PYWebService PYWebSite PYWorker PYWPFApplication QueryExtender QueryStringParameter QueryView QueryViewError QueryVi...
Latent representations of the amino acid sequences of 217,123 enzymes in the Swiss-Prot database were visualized using the TMAP algorithm30and Faerun library44,45. The embedded latent vectors before the last linear layer were used as the latent representations. To construct a tree map that compa...
To address these challenges, we presentDevelopmentalCellPrediction inPython (devCellPy) a Python-based package for the automated prediction of cell identities across highly complex annotation hierarchies obtained from any tissue or species. The basis fordevCellPy’s prediction model is extreme gradient ...
As we mentioned in the Preface, the Natural Language Toolkit (NLTK), described in the O’Reilly book Natural Language Processing with Python, is a wonderful introduction to the techniques necessary to build many of the applications described in the preceding list. One of the goals of this book...
Given the fraction of ambient RNA, f drop, and the library size, \(d_\mu ^{{\mathrm{cell}}}\), and scale, \(d_\sigma ^{{\mathrm{cell}}}\), used for sampling the cell size, \(d_n^{{\mathrm{cell}}},d_n^{{\mathrm{drop}}}\) ~ logNormal(\(d_\mu ^{{\mathrm{cell}...
models: The built-in annotation feature of modeling tools is used, a generic profile for Java is provided, which enables capturing annotations and their type declarations, and profiles are offered, which are specific to a Java library or even an application with custom annotation type declarations...
a library for audio and music analysis audiopythonmusiccannotationanalysisextractionsoundbeatmfcconsetpitchtempo-tracking UpdatedAug 3, 2024 C Annotate with anyone, anywhere. pythonannotationhypothesis UpdatedJan 15, 2025 Python erupts/erupt Star2.5k ...