PyTorch Geometric:用于处理图结构数据的库,可以与 AlphaFold3-PyTorch 结合使用,进行更复杂的结构分析。 Biopython:用于处理生物序列数据的库,可以用于数据预处理和结果验证。 RDKit:用于化学信息学的库,可以用于分子结构的表示和分析。 通过这些生态项目的结合使用,可以进一步扩展 AlphaFold3-PyTorch 的功能和应用范围。
alphafold3_pytorch exploit ellipsis in jaxtyping May 15, 2024 docs commit in supplementary May 13, 2024 tests make sure runtime typecheck is turned on during pytest May 15, 2024 .env.sample check in a sample file of .env May 13, 2024 .gitignore use an environmental variable TYPECHECK to...
alphafold3_pytorch/alphafold3.py +10-6 Original file line numberDiff line numberDiff line change @@ -119,7 +119,7 @@ 119119 120120 fromcolt5_attentionimportConditionalRoutedAttention 121121 122- fromhyper_connectionsimportHyperConnections ...
Protenix是一个基于PyTorch开发的蛋白质结构预测模型,能够复现AlphaFold 3的功能,并扩展到更广泛的分子结构预测领域1216 0 2025-01-16 11:00:29 未经作者授权,禁止转载 您当前的浏览器不支持 HTML5 播放器 请更换浏览器再试试哦~11 2 25 4 - 结构
Protenix一个基于PyTorch开发的蛋白质结构预测模型,能够复现AlphaFold 3的功能,并扩展到更广泛的分子结构预测领域#科研#研究生#硕博圈#蛋白结构 - 小钱博后中于20250116发布在抖音,已经收获了76.2万个喜欢,来抖音,记录美好生活!
Breadcrumbs alphafold3-pytorch / pyproject.tomlTop File metadata and controls Code Blame 64 lines (54 loc) · 1.24 KB Raw [project] name = "alphafold3-pytorch" version = "0.0.1" description = "Alphafold 3 - Pytorch" authors = [ { name = "Phil Wang", email = "lucidrains@gmail.com...
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from alphafold3_pytorch import ( PairformerStack ) def test_pairformer(): single = torch.randn(2, 16, 512) pairwise = torch.randn(2, 16, 16, 256) mask = torch.randint(0, 2, (2, 16)).bool() pairformer = PairformerStack( depth = 4, dim_single = 512, dim_pairwise = 256 )...
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