# 需要導入模塊: from Bio.Align.Generic import Alignment [as 別名]# 或者: from Bio.Align.Generic.Alignment importget_alignment_length[as 別名]seq1='MHQAIFIYQIGYPLKSGYIQSIRSPEYDNW'seq2='MH--IFIYQIGYALKSGYIQSIRSPEY-NW'align=Alignment(Bio.Alphabet.Gapped(IUPAC.protein))#instance of Align...
expectedRecordPtr->myMatePosition =1010; expectedRecordPtr->myInsertSize =0;// Check the alignment endassert(samRecord.get0BasedAlignmentEnd() ==1016); assert(samRecord.get1BasedAlignmentEnd() ==1017); assert(samRecord.getAlignmentLength() ==7); assert(samRecord.get0BasedUnclippedStart() ==...
Jacknife Support for Exafroplacentalia Depending on the Alignment LengthSergey NikolaevJuan I MontoyaBurgosElliott H MarguliesJacques RougemontBruno NyffelerStylianos E Antonarakis
Comparison of pair-wise distance (p-distance), alignment length, and parsimony informative characters of each gene.Hai, D. T. NguyenSašo, JančičMartin, MeijerJoey, B. TanneyPolona, ZalarNina, GundeCimermanKeith A., Seifert
Pairwise Alignment Result Length 1088Print, FriendlySpace, User
aWhen it is necessary to reverse the alignment, a preferable design consists of two simple horizontal curves, separated by a sufficient length of tangent between them, to achieve full superelevation. 当扭转对准线时是必要的,一个更好的设计包括二简单的水平的曲线,分离由正切的充足的长度在他们之间,达...
More recently, however, several computational methods have been developed for simultaneous estimation of the alignment and the tree, of which POY ( a heuristic for the NP-hard minimum treelength problem, which extends maximum parsimony ( MP) so that gaps contribute to the cost) is the most ...
A microcode branch, to one of a number of possible control words (57) (sixteen control words are described), is based upon (1) the remaining operand length that is to be processed by a left to right instruction, and (2) by the byte alignment of the portion of the operand that current...
self.assertTrue(Alignment([ DNA('TTT', metadata={'id':"d1"})])._validate_lengths()) 开发者ID:jhcepas,项目名称:scikit-bio,代码行数:104,代码来源:test_alignment.py # 需要导入模块: from skbio import Alignment [as 别名]# 或者: from skbio.Alignment importsequence_length[as 别名]#...这...
self.assertEqual(aln.totalLength,59970) self.assertEqual(aln.numRecords,112) 开发者ID:PacificBiosciences,项目名称:pbcore,代码行数:32,代码来源:test_pbdataset_subtypes.py 示例3: test_len ▲点赞 5▼ # 需要导入模块: from pbcore.io import AlignmentSet [as 别名]# 或者: from pbcore.io.Alignment...