The Revised Train set(https://github.com/lopuhin/kaggle‐dsbowl‐2018‐dataset‐fixes) 2009 ISBI (http://murphylab.web.cmu.edu/data/2009_ISBI_Nuclei.html) Weebly (https://nucleisegmentationbenchmark.weebly.com/) TNBC (https://zenodo.org/record/1175282#.Ws2n_vkdhfA) ...
dataset: DSB2018Dataset batch_size: 32 num_workers: 8 train: file_paths: - PATH_TO_TRAIN_DIR transformer: raw: - name: CropToFixed size: [256, 256] - name: Standardize - name: RandomFlip - name: RandomRotate90 - name: RandomRotate axes: [[2, 1]] angle...
import json from pathlib import Path import numpy as np from PIL import Image from pycocotools import mask as mask_util ROOT_DIR = Path('/media/gangadhar/DataSSD1TB/ROOT_DATA_DIR/') DATASET_WORKING_DIR = ROOT_DIR / 'Nuclei' annotations_file = DATASET_WORKING_DIR / 'annotations/stage1_...
The Revised Train set(https://github.com/lopuhin/kaggle‐dsbowl‐2018‐dataset‐fixes) 2009 ISBI (http://murphylab.web.cmu.edu/data/2009_ISBI_Nuclei.html) Weebly (https://nucleisegmentationbenchmark.weebly.com/) TNBC (https://zenodo.org/record/1175282#.Ws2n_vkdhfA) ...