Improvements to temporary file handling for all LD functions Added --chrom-map option to allow user specified chromosomes for writing out plink files Allow site filtering with multiple keep and exclude files Tajima's D now reports NaN in the absence of data Various bug fixes Assets2...
生信小白成长记——如何使用VCFtools和GCTA软件计算FST 前面两期我们学习了使用rehh包通过iHS和XP-EHH方法来检测群体内和群体间的选择信号,今天生信小白继续为大家讲解一下另一种检测群体间选择信号的方法—Fst。 群体遗传学中衡量群体间分化程度的指标有很多种,最常用的就是Fst指数。Fst指数,由F统计量演变而来。F统计...
I have introduced a few small changes in order to allow computation of statistics with haploid data. When enabling the --haploid switch, vcftools will assume that genotypes are haploid instead of d...