The universal phylogenetic tree not only spans all extant life, but its root and earliest branchings represent stages in the evolutionary process before modern cell types had come into being. The evolution of the cell is an interplay between vertically derived and horizontally acquired variation. Pri...
Paper presented at the National Association for Research in Science Teaching. Baltimore; 2008.Halverson, K. L., Pires, J. C., & Abell, S. K. (2008). Undergraduates‟ abilities to use representations in biology: Interpreting phylogenetic tree thinking, National Association for Research in ...
Biological species are universal across life’s domains. Genome Biol. Evol. 9, 491–501 (2017). PubMed Central Google Scholar Moldovan, M. A. & Gelfand, M. S. Pangenomic definition of prokaryotic species and the phylogenetic structure of Prochlorococcus spp. Front. Microbiol. 9, 428 (...
BCRs were embedded by (a,b) the Benisse BCR encoder (the deep learning only part); (c,d) bcRep; and (e,f) the Lindenbaum method. (a,c,e) A phylogenetic tree of BCRs was constructed from the distance matrices of BCRs calculated according to the BCR embeddings. The trees were roo...
Many regulatory processes in the cell are based on the control of gene expression through the interaction of transcription factors. However, enzymatic regu... A Lourenço,S Carneiro,JP Pinto,... 被引量: 1发表: 2011年 Interpreting the universal phylogenetic tree The universal phylogenetic tree no...
Used as a phylogenetic marker, 16S amplicon sequences give a measure of bacterial biodiversity and allow the species composition of different environments to be compared. However, large metabolic differences can be seen between strains with near identical 16S sequences [52,53], highlighting that 16S...