QIIME 2采用对象代替原始数据文件(如fasta文件),因此分析者必须导入数据来创建QIIME 2对象。虽然典型的分析是从原始数据开始导入QIIME 2,但你可以在分析的任何步骤导入数据为对象。QIIME 2也有工具可以从QIIME2文件中导出数据,详见导出(importing)章节。 使用QIIME2对象代替简单的数据,可以自动追踪文件类型、格式和分析过程。
conda update conda #安装qiime2-2020.6,下载安装所有依赖关系,网速不同,时间差别很大,我安装大约半小时 wget -c https://data.qiime2.org/distro/core/qiime2-2020.6-py36-linux-conda.yml conda env create -n qiime2-2020.6 --file qiime2-2020.6-py36-linux-conda.yml rm qiime2-2020.6-py36-linux-con...
HTTP errors are often intermittent, and a simple retry will get you on your way. conda无法安装更新, 解决方法: #首先先添加清华的镜像源 conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/msys2/ conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/ana...
pip install https://github.com/qiime2/qiime2/archive/master.zip https://github.com/qiime2/q2cli/archive/master.zip --force-reinstall -I pip install git+https://github.com/biocore/emperor.git@new-api --force-reinstall -I pip install https://github.com/ElDeveloper/q2-emperor/archive/master...
FastTree build recommended for install does not run on RHEL6 qiime2/qiime2#191 Closed Member jairideout commented Apr 27, 2017 This is important for the next release -- @wasade ran into it and also our institutional cluster. jairideout added the type:bug label May 11, 2017 jairide...
//conda.anaconda.org/qiime2/linux-64 https://conda.anaconda.org/qiime2/noarch https://conda.anaconda.org/biocore/linux-64 https://conda.anaconda.org/biocore/noarch https://conda.anaconda.org/jolespin/linux-64 https://conda.anaconda.org/jolespin/noarch https://conda.anaconda.org/ursky/...